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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pigy, phosphatidylinositol glycan anchor biosynthesis, class Y
Sequence ID:NM_025574
Entrez Gene ID:66459
Ensembl ID:ENSMUSG00000043162

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 57689350 - 57692077

NM_025574 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
151405763473257639871
514154105764180257642071

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4164517Full LengthBC029232phosphatidylinositol glycan anchor biosynthesis, class Y

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079850  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025574 NP_079850 Q9D1C3 Trm112p

Related Sequences

 
mRNAGenPeptSwissProt
BC029232 AAH29232 Q9D1C3
AK003713 BAB22953 Q9D1C3
AK029193 BAC26342 Q9D1C3
AK032381 BAC27846 Q9D1C3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pigy NP_079850 R.norvegicus Pigy 502782   NP_001019541 78
H.sapiens PIGY 84992 Gene Info NP_116295 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)