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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ssc5d, scavenger receptor cysteine rich domain containing (5 domains)
Sequence ID:NM_173008
Entrez Gene ID:269855
Ensembl ID:ENSMUSG00000035279

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 4925843 - 4944821

 Exon Info From UCSC:
NM_173008

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055656Full LengthBC141044RIKEN cDNA A430110N23 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766596  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_173008 NP_766596 Q8BV57 SRCR

Related Sequences

 
mRNAGenPeptSwissProt
BC141044 AAI41045 Q8BV57
EU850434 ACF54723 Q8BV57
AK079906 BAC37780 Q8BV57
AK165666 BAE38328 Q8BV57

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus A430110N23Rik NP_766596 R.norvegicus Ssc5d 308341   NP_001128017 90
H.sapiens SSC5D 284297 Gene Info NP_001138422 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)