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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacna1s, calcium channel, voltage-dependent, L type, alpha 1S subunit
Sequence ID:NM_001081023
NM_014193
Entrez Gene ID:12292
Ensembl ID:ENSMUSG00000026407

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 F|1 69.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 136073553 - 136119529

 Exon Info From UCSC:
NM_001081023
NM_014193

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069449Full LengthBC172641calcium channel, voltage-dependent, L type, alpha 1S subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081023 NP_001074492    
NM_014193 NP_055008    

Related Sequences

 
mRNAGenPeptSwissProt
M57968 AAA03684 Q02789
M57976 AAA63290 Q02789
L06234 AAB59700 Q02789
BC134369 AAI34370 A3KPC9
BC172641 AAI72641  
AK142239 BAE24989 Q3UQQ0
AK143541 BAE25427 Q3UPG8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna1s NP_001074492 H.sapiens CACNA1S 779 Gene Info NP_000060 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)