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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ifltd1, Intermediate filament tail domain containing 1
Sequence ID:NM_028742
Entrez Gene ID:74071
Ensembl ID:ENSMUSG00000054966

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 G3|6 71.3

Chromosomal Position (from UCSC)

Chromosomal Position:6: 145397234 - 145434925

NM_028742 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1142145345754145345895
143315145352972145353144
316521145361902145362107
522641145365919145366038
642828145368207145368393
8291024145375798145375993
10251275145378399145378649
12761385145382205145382314
13861513145382393145382520
15141534145383424145383444

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6705208Full LengthBC053420intermediate filament tail domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_083018  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028742 NP_083018 Q9D4C1 IF_tail

Related Sequences

 
mRNAGenPeptSwissProt
BC053420 AAH53420 Q9D4C1
AY753326 AAV31718 Q9D4C1
AK016641 BAB30353 Q9D4C1
AK052206 BAC34885 Q8BWL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifltd1 NP_083018 R.norvegicus Ifltd1 500362   XP_575719 75
H.sapiens IFLTD1 160492 Gene Info NP_001139200 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)