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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Syn2, synapsin II
Sequence ID:NM_001111015
Entrez Gene ID:20965
Ensembl ID:ENSMUSG00000009394

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F|6 50.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 115134901 - 115275078

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5701861Full LengthBC085129synapsin II
5701699IncompleteBC066004synapsin II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038709  

Protein Infomation

NM_001111015 NP_001104485 Q64332  
NM_013681 NP_038709   Synapsin_N

Related Sequences

AF096867 AAC72966 Q64332
BC066004 AAH66004 Q64332
BC085129 AAH85129 Q64332
AK029181 BAC26339 Q8CE19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Syn2 NP_001104485 R.norvegicus Syn2 29179   NP_001029192 98
H.sapiens SYN2 6854 Gene Info NP_598328 96
D.melanogaster Syn 41247   NP_731459 43
A.gambiae AgaP_AGAP003318 4577141   XP_553315 40
C.elegans snn-1 176987   NP_741326 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)