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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sh2d1a, SH2 domain protein 1A
Sequence ID:NM_011364
Entrez Gene ID:20400
Ensembl ID:ENSMUSG00000005696

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X|X A5

Chromosomal Position (from UCSC)

Chromosomal Position:X: 42502564 - 42522095

NM_011364 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12523985578439856035
2533163986846339868526
3174583987381939873960
4598193987489139875251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056424Full LengthBC147367SH2 domain protein 1A
9056435Full LengthBC147368SH2 domain protein 1A
9087524Full LengthBC147807SH2 domain protein 1A
9087528Full LengthBC147811SH2 domain protein 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035494  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011364 NP_035494 Q544F1
O88890
SH2

Related Sequences

 
mRNAGenPeptSwissProt
AF072903 AAC62629 Q544F1
O88890
AF097632 AAC95998 O88890
AF097633 AAC95999 Q544F1
O88890
BC065390 AAH65390 Q6P0X5
BC147367 AAI47368 Q544F1
BC147368 AAI47369 Q544F1
BC147807 AAI47808 B2RWI0
BC147811 AAI47812 B2RWI0
AK040076 BAC30506 Q544F1
O88890

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sh2d1a NP_035494 R.norvegicus Sh2d1a 501502   NP_001102783 97
H.sapiens SH2D1A 4068 Gene Info NP_002342 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)