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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clstn2, calsyntenin 2
Sequence ID:NM_022319
Entrez Gene ID:64085
Ensembl ID:ENSMUSG00000032452

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 E4|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 97444855 - 98033115

 Exon Info From UCSC:
NM_022319

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5705591Full LengthBC063058calsyntenin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071714  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022319 NP_071714 Q9ER65 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
BC063058 AAH63058 Q9ER65
AK048369 BAC33313 Q9ER65
AK220500 BAD90297 Q9ER65
AJ278069 CAC14887 Q9ER65

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clstn2 NP_071714 R.norvegicus Clstn2 171394   NP_599204 98
H.sapiens CLSTN2 64084 Gene Info NP_071414 95
A.gambiae AgaP_AGAP007103 4576322   XP_001688050 36
D.melanogaster cals 43824   NP_726646 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)