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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Smyd1, SET and MYND domain containing 1
Sequence ID:NM_001160127
NM_009762
Entrez Gene ID:12180
Ensembl ID:ENSMUSG00000055027

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C1|6 30.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 71309358 - 71322206

 Exon Info From UCSC:
NM_001160127
NM_009762

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30609878Full LengthBC076601SET and MYND domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160127 NP_001153599 P97443  
NM_009762 NP_033892   SET
zf-MYND

Related Sequences

 
mRNAGenPeptSwissProt
U76371 AAC53020 P97443
U76373 AAC53021 P97443
U76374 AAC53022 P97443
BC076601 AAH76601 P97443
AK027936 BAC25673 Q8BMV4
AK142153 BAE24950 Q3UQT9
AK142252 BAE24995 P97443

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smyd1 NP_033892 R.norvegicus Smyd1 297333   NP_001100065 98
H.sapiens SMYD1 150572 Gene Info NP_938015 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)