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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cfd, complement factor D (adipsin)
Sequence ID:NM_013459
Entrez Gene ID:11537
Ensembl ID:ENSMUSG00000061780

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 79890909 - 79892652

NM_013459 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11287935359779353724
1292857935420079354356
2864337935444779354594
4346917935473679354993
6929237935516979355400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861800Full LengthBC138778complement factor D (adipsin)
8861801Full LengthBC138779complement factor D (adipsin)
9053970Full LengthBC145412complement factor D (adipsin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038487  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013459 NP_038487 P03953
Q3UP47
EC 3.4.21.46 Trypsin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M11768 AAA40486 P03953
Q3UP47
EC 3.4.21.46
BC138778 AAI38779 Q3UP47  
BC138779 AAI38780 Q3UP47  
BC145412 AAI45413 B7ZNS9  
AK143817 BAE25550 P03953
Q3UP47
EC 3.4.21.46

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cfd NP_038487 R.norvegicus Cfd 54249   NP_001071110 84
H.sapiens CFD 1675 Gene Info NP_001919 67
D.melanogaster CG16998 38847   NP_648134 35
D.melanogaster CG32374 38848   NP_729270 30
D.melanogaster CG32376 318002   NP_729271 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta