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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Poc1b, POC1 centriolar protein homolog B (Chlamydomonas)
Sequence ID:NM_027740
Entrez Gene ID:382406
Ensembl ID:ENSMUSG00000019952

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 C3

Chromosomal Position (from UCSC)

Chromosomal Position:10: 99107814 - 99196968

 Exon Info From UCSC:
NM_027740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40131104Full LengthBC145801WD repeat domain 51B
6418526IncompleteBC050888WD repeat domain 51B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082016  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027740 NP_082016 Q8BHD1 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC145801 AAI45802 A6H699
AK016991 BAB30542 Q9D3W6
AK030180 BAC26826 Q9D3W6
AK045302 BAC32302 Q8BHD1
AK050233 BAC34138 Q8BHD1
AK090075 BAC41080 Q8BHD1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Poc1b NP_082016 R.norvegicus LOC100362836 100362836   XP_002729827 91
H.sapiens POC1B 282809 Gene Info NP_758440 82
A.gambiae AgaP_AGAP012029 1280633   XP_320491 45
D.melanogaster Poc1 39502   NP_648640 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)