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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Mmp9, Matrix metallopeptidase 9
Sequence ID:NM_013599
Entrez Gene ID:17395
Ensembl ID:ENSMUSG00000017737

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H1-H2|2 96.0

Chromosomal Position (from UCSC)

Chromosomal Position:2: 164948239 - 164955832

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6309245Full LengthBC046991matrix metallopeptidase 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038627  

Protein Infomation

NM_013599 NP_038627 P41245 EC fn2

Related Sequences

S67830 AAB28942 P41245 EC
BC046991 AAH46991 P41245 EC
AY622969 AAT46400 Q6GXA2  
D12712 BAA02208 P41245 EC
AK004651 BAB23442 P41245 EC
AK142787 BAE25191 Q3UQ52  
AK159292 BAE34968 P41245 EC
AK161176 BAE36227 Q3TTU7  
X72795 CAA51315 P41245 EC
Z27231 CAA81745 P41245 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Mmp9 NP_038627 R.norvegicus Mmp9 81687   NP_112317 86
H.sapiens MMP9 4318 Gene Info NP_004985 75
A.thaliana AT2G45040 819111   NP_182030 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta