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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Niacr1, niacin receptor 1
Sequence ID:NM_030701
Entrez Gene ID:80885
Ensembl ID:ENSMUSG00000045502

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 123863576 - 123865496

NM_030701 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11938124313580124315517

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129638Full LengthBC120715niacin receptor 1
40129811Full LengthBC125296niacin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_109626  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030701 NP_109626 Q9EP66 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC120715 AAI20716 Q0VBA6
Q9EP66
BC125296 AAI25297 Q0VBA6
AK150795 BAE29858 Q9EP66
AJ300198 CAC17790 Q9EP66

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Niacr1 NP_109626 R.norvegicus Niacr1 353250   NP_852141 95
H.sapiens HCAR2 338442 Gene Info NP_808219 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)