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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Med20, mediator complex subunit 20
Sequence ID:NM_020048
Entrez Gene ID:56771
Ensembl ID:ENSMUSG00000092558

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 C|17

Chromosomal Position (from UCSC)

Chromosomal Position:17: 47611630 - 47624251

NM_020048 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1974774854447748640
982524774991147750065
2535064775575747756010
50720404775983347761366

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6408678Full LengthBC060122mediator complex subunit 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064432  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020048 NP_064432 Q9R0X0 TATA_RF

Related Sequences

 
mRNAGenPeptSwissProt
BC060122 AAH60122 Q9R0X0
AK043396 BAC31536 Q9R0X0
AK146345 BAE27098 Q9R0X0
AK019130 BAE43254 Q9R0X0
AJ245617 CAB53514 Q9R0X0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Med20 NP_064432 R.norvegicus Med20 316209   NP_001013196 98
H.sapiens MED20 9477 Gene Info NP_004266 97
A.gambiae MED20_ANOGA 1276291   XP_315616 46
D.melanogaster MED20 43952   NP_524663 44
C.elegans mdt-20 176937   NP_500050 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)