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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Chad, chondroadherin
Sequence ID:NM_007689
Entrez Gene ID:12643
Ensembl ID:ENSMUSG00000039084

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11 54.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 94565046 - 94569126

NM_007689 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
17959442638794427181
7969599442911194429274
96011059442952294429667
110616539442989394430440

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4192855Full LengthBC012672chondroadherin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031715  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007689 NP_031715 O55226 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC012672 AAH12672 O55226
AK158297 BAE34451 Q3TYW1
O55226
AK160489 BAE35820 Q3TV01

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chad NP_031715 R.norvegicus Chad 29195   NP_062037 97
H.sapiens CHAD 1101 Gene Info NP_001258 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)