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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nup62, nucleoporin 62
Sequence ID:NM_053074
Entrez Gene ID:18226
Ensembl ID:ENSMUSG00000043858

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 23.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 44830447 - 44831833

NM_053074 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1645207178952071852
6523845208385652086175

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3603287Full LengthBC005784nucleoporin 62
6829463Full LengthBC089317nucleoporin 62

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053074 NP_444304 Q63850
Q5FWJ9
Nsp1_C

Related Sequences

 
mRNAGenPeptSwissProt
S59342 AAB19953 Q63850
BC005784 AAH05784 Q63850
Q5FWJ9
BC089317 AAH89317 Q63850
Q5FWJ9
AK147894 BAE28211 Q3UGJ7
AK149637 BAE28999 Q63850
Q5FWJ9
AK150087 BAE29296 Q3UDG5
AK155059 BAE33019 Q3U2X1
AK166621 BAE38900 Q63850
Q5FWJ9
AK168166 BAE40127 Q3THR9
AK168486 BAE40373 Q63850
Q5FWJ9
AK169178 BAE40956 Q3TFE2
AK171455 BAE42464 Q63850
Q5FWJ9
AK171611 BAE42562 Q63850
Q5FWJ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nup62 NP_444304 R.norvegicus Nup62 65274   NP_075586 95
H.sapiens NUP62 23636 Gene Info NP_001180286 81
A.gambiae AgaP_AGAP010978 1270979   XP_309717 43
D.melanogaster Nup62 36830   NP_611120 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)