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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arntl, aryl hydrocarbon receptor nuclear translocator-like
Sequence ID:NM_001243048
NM_007489
Entrez Gene ID:11865
Ensembl ID:ENSMUSG00000055116

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F2-F3|7 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 113280662 - 113313806


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3661605Full LengthBC011080aryl hydrocarbon receptor nuclear translocator-like
3980719Full LengthBC025973aryl hydrocarbon receptor nuclear translocator-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243048 NP_001229977    
NM_007489 NP_031515 Q3UHZ2 HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProt
BC011080 AAH11080 Q9WTL8
BC025973 AAH25973 Q9WTL8
Q3UHZ2
AY690602 AAU00990 Q68HB9
AB014494 BAA32208 Q9WTL8
Q3UHZ2
AB012601 BAA76414 Q9WTL8
AB012602 BAA76415 Q9WTL8
Q6F6D5
AB015203 BAA81898 Q9WTL8
AK146628 BAE27317 Q3UHZ2
AK147145 BAE27714 Q3UHZ2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arntl NP_031515 R.norvegicus Arntl 29657   NP_077338 99
H.sapiens ARNTL 406 Gene Info NP_001169 98
A.gambiae AgaP_AGAP005655 1276339   XP_556301 55
D.melanogaster cyc 40162   NP_524168 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta