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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cdh23, cadherin 23 (otocadherin)
Sequence ID:NM_001252635
NM_023370
NR_045556
Entrez Gene ID:22295
Ensembl ID:ENSMUSG00000012819

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10 30.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 60303373 - 60657333


Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_075859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252635 NP_001239564    
NM_023370 NP_075859 Q99PF4 Cadherin

Related Sequences

 
mRNAGenPeptSwissProt
AF308939 AAG52817 Q99PF4
AY026062 AAK07670 Q99PF4
AY563159 AAT72159 Q5QGS8
AY563160 AAT72160 Q5QGS7
AY563163 AAT72163 Q5QGS4
AY563164 AAT72164 Q5QGS3
EU681829 ACG63553 B8QRJ1
EU681830 ACG63554 B8QRJ2
AJ888000 CAI59609 Q5DUA5
AJ888001 CAI59610 Q5DUA4
AJ888002 CAI59611 Q5DUA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cdh23 NP_075859 R.norvegicus Cdh23 114102   NP_446096 98
H.sapiens CDH23 64072 Gene Info NP_071407 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)