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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vamp5, vesicle-associated membrane protein 5
Sequence ID:NM_001080742
NM_016872
Entrez Gene ID:53620
Ensembl ID:ENSMUSG00000073002

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 72369030 - 72370332

 Exon Info From UCSC:
NM_001080742
NM_016872

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6758831Full LengthBC086925vesicle-associated membrane protein 5
9053697Full LengthBC145146vesicle-associated membrane protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058568  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080742 NP_001074211    
NM_016872 NP_058568 Q791P0
Q9Z2P8
Synaptobrevin

Related Sequences

 
mRNAGenPeptSwissProt
AF035643 AAC95282 Q791P0
Q9Z2P8
AF119384 AAD29365 Q9WU73
BC086925 AAH86925 Q5M9K2
BC145146 AAI45147 Q9WU73
AK009266 BAB26182 Q791P0
Q9Z2P8
AK145137 BAE26254 Q3UM44

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vamp5 NP_001074211 R.norvegicus Vamp5 89818   NP_446007 88
H.sapiens VAMP5 10791 Gene Info NP_006625 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)