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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hmga1, high mobility group AT-hook 1
Sequence ID:NM_001025427
NM_001039356
NM_001166535
NM_001166536
NM_001166537
NM_001166539
NM_001166540
NM_001166541
NM_001166542
NM_001166543
NM_001166544
NM_001166545
NM_001166546
NM_016660
Entrez Gene ID:15361
Ensembl ID:ENSMUSG00000046711

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, eye, fetus, gastrointestinal tract, heart, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, peripheral nervous system, placenta, retina, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 13.19 cM

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

 Exon Info From UCSC:
NM_001025427
NM_001039356
NM_001166535
NM_001166536
NM_001166537
NM_001166539
NM_001166540
NM_001166541
NM_001166542
NM_001166543
NM_001166544
NM_001166545
NM_001166546
NM_016660

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3601855Full LengthBC093496high mobility group AT-hook 1
4219805Full LengthBC013455high mobility group AT-hook 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025427 NP_001020598 Q566K0
P17095
AT_hook
NM_001039356 NP_001034445    
NM_001166535 NP_001160007    
NM_001166536 NP_001160008    
NM_001166537 NP_001160009    
NM_001166539 NP_001160011    
NM_001166540 NP_001160012    
NM_001166541 NP_001160013    
NM_001166542 NP_001160014    
NM_001166543 NP_001160015    
NM_001166544 NP_001160016    
NM_001166545 NP_001160017    
NM_001166546 NP_001160018    
NM_016660 NP_057869 Q3TVP0 AT_hook

Related Sequences

 
mRNAGenPeptSwissProt
J04179 AAA37820 P17095
Q3TVP0
AK010617 BAB27065 P17095
Q3TVP0
AK154957 BAE32952 Q566K0
P17095
AK155661 BAE33373 Q3TVP0
AK160036 BAE35578 Q3TVP0
AK169783 BAE41363 Q3TE85
AK171334 BAE42398 Q566K0
P17095

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)