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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gm6484, predicted gene 6484
Sequence ID:NM_001080940
Entrez Gene ID:624219
Ensembl ID:ENSMUSG00000047822

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A3|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 21835566 - 21837324

NM_001080940 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13052163995321640257
3064672164035921640520
4685772164128621641395
5788652164150321641790

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1067123IncompleteBC038127similar to hepatocellular carcinoma-associated gene TD26
1313868IncompleteBC051501predicted gene, EG624219
5050186IncompleteBC024408predicted gene, EG624219

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080940 NP_001074409 Q8R1L8  

Related Sequences

 
mRNAGenPeptSwissProt
BC024408 AAH24408 Q8R1L8
BC051501 AAH51501 Q80WX2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gm6484 NP_001074409 R.norvegicus LOC100361444 100361444   XP_002729923 87
H.sapiens C19orf80 55908 Gene Info NP_061157 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)