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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lime1, Lck interacting transmembrane adaptor 1
Sequence ID:NM_023684
Entrez Gene ID:72699
Ensembl ID:ENSMUSG00000090077

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 181381234 - 181383628

NM_023684 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11080181115939181117018
10811138181117191181117248
11391226181117320181117407
12271588181117503181117864
15891959181117962181118332

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5357176Full LengthBC023065Lck interacting transmembrane adaptor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023684 NP_076173 Q9EQR5  

Related Sequences

 
mRNAGenPeptSwissProt
AF115339 AAG35210 Q9EQR5
BC023065 AAH23065 Q9EQR5
AK172632 BAE43105 Q3T9B9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lime1 NP_076173 R.norvegicus Lime1 362289   NP_001102084 92
H.sapiens LIME1 54923 Gene Info NP_060276 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)