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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tpd52l1, tumor protein D52-like 1
Sequence ID:NM_009413
Entrez Gene ID:21987
Ensembl ID:ENSMUSG00000000296

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 A4-B2

Chromosomal Position (from UCSC)

Chromosomal Position:10: 31332379 - 31445921

NM_009413 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15903105218531052774
5916513105799031058050
6526903106094531060983
6917923106641631066517
7939413107767731077825
94210573109902031099135
105812673116551731165726

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053876Full LengthBC145321tumor protein D52-like 1
9055680Full LengthBC141068tumor protein D52-like 1
100063875Full LengthBC160227tumor protein D52-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033439  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009413 NP_033439 O54818 TPD52

Related Sequences

 
mRNAGenPeptSwissProt
AF004428 AAC98476 O54818
BC141068 AAI41069 B2RUC1
BC145321 AAI45322 B2RUC1
BC160227 AAI60227  
AK131855 BAE20832 Q3V2G6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tpd52l1 NP_033439 R.norvegicus Tpd52l1 689256   NP_001037760 94
H.sapiens TPD52L1 7164 Gene Info NP_003278 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)