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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrrc17, leucine rich repeat containing 17
Sequence ID:NM_028977
Entrez Gene ID:74511
Ensembl ID:ENSMUSG00000039883

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 A3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 21543562 - 21575898

NM_028977 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11932104934421049536
19410932106621721067116
109412492107603721076192
125021882108078121081719

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5372009Full LengthBC030317leucine rich repeat containing 17

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028977 NP_083253 Q9CXD9  

Related Sequences

 
mRNAGenPeptSwissProt
BC030317 AAH30317 Q9CXD9
AK018071 BAB31060 Q9CXD9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrc17 NP_083253 R.norvegicus Lrrc17 502715   NP_001020326 95
H.sapiens LRRC17 10234 Gene Info NP_001026862 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)