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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. C1qa, complement component 1, q subcomponent, alpha polypeptide
Sequence ID:NM_007572
Entrez Gene ID:12259
Ensembl ID:ENSMUSG00000036887

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D3|4 66.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 136895917 - 136898769

NM_007572 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1813136451830136452642
814983136453589136453758
9841082136454660136454758

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3592169Full LengthBC002086complement component 1, q subcomponent, alpha polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031598  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007572 NP_031598 P98086 C1q
Collagen

Related Sequences

 
mRNAGenPeptSwissProt
BC002086 AAH02086 P98086
AK002655 BAB22262 P98086
AK136737 BAE23115 P98086
AK150771 BAE29837 Q3UBX7
AK159210 BAE34901 P98086
AK159343 BAE35005 Q3TXB1
X58861 CAA41664 P98086

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus C1qa NP_031598 R.norvegicus C1qa 298566   NP_001008515 89
H.sapiens C1QA 712 Gene Info NP_057075 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta