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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. 0610031J06Rik, RIKEN cDNA 0610031J06 gene
Sequence ID:NM_020003
Entrez Gene ID:56700
Ensembl ID:ENSMUSG00000001418

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 88325066 - 88328631

NM_020003 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11798812894488129122
1804348812959888129852
4356328813003688130233
6338518813033288130550
85211088813177888132034
110915378813212488132552

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4507218Full LengthBC021547RIKEN cDNA 0610031J06 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020003 NP_064387 Q9JHJ3  

Related Sequences

 
mRNAGenPeptSwissProt
BC021547 AAH21547 Q9JHJ3
AB027141 BAA92527 Q9JHJ3
AB027142 BAA95676 Q9JHJ3
AK075614 BAC35859 Q9JHJ3
AK150794 BAE29857 Q9JHJ3
AK154340 BAE32526 Q9JHJ3
AK160793 BAE36016 Q9JHJ3
AK170696 BAE41960 Q9JHJ3
AK171042 BAE42207 Q9JHJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 0610031J06Rik NP_064387 R.norvegicus RGD1303130 295231   NP_001004226 93
H.sapiens C1orf85 112770 Gene Info NP_653181 80
A.gambiae AgaP_AGAP004431 1274574   XP_313717 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)