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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tacstd2, tumor-associated calcium signal transducer 2
Sequence ID:NM_020047
Entrez Gene ID:56753
Ensembl ID:ENSMUSG00000051397

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 C1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 67534110 - 67535796

NM_020047 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
117646748405267485815

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40088161Full LengthBC117719tumor-associated calcium signal transducer 2
40088163Full LengthBC117720tumor-associated calcium signal transducer 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064431  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020047 NP_064431 Q8BGV3 Thyroglobulin_1

Related Sequences

 
mRNAGenPeptSwissProt
BC117719 AAI17720 Q8BGV3
BC117720 AAI17721 Q8BGV3
AK076410 BAC36328 Q8BGV3
AK077370 BAC36773 Q8BGV3
AK085753 BAC39531 Q8BGV3
AK155470 BAE33281 Q3U261

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tacstd2 NP_064431 R.norvegicus Tacstd2 494343   NP_001009540 94
H.sapiens TACSTD2 4070 Gene Info NP_002344 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)