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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syn1, synapsin I
Sequence ID:NM_001110780
NM_013680
Entrez Gene ID:20964
Ensembl ID:ENSMUSG00000037217

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1-A4|X 6.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 20860510 - 20920896

 Exon Info From UCSC:
NM_001110780
NM_013680

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5368098Full LengthBC022954synapsin I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038708  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001110780 NP_001104250    
NM_013680 NP_038708 O88935 Synapsin_N
Synapsin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC022954 AAH22954 O88935

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syn1 NP_038708 R.norvegicus Syn1 24949   NP_062006 98
H.sapiens SYN1 6853 Gene Info NP_008881 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)