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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scaf4, SR-related CTD-associated factor 4
Sequence ID:NM_178923
Entrez Gene ID:224432
Ensembl ID:ENSMUSG00000022983

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C3.3|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 90228956 - 90284422

 Exon Info From UCSC:
NM_178923

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6401143Full LengthBC053096splicing factor, arginine/serine-rich 15
6417362Full LengthBC057592splicing factor, arginine/serine-rich 15
4527716IncompleteBC041782splicing factor, arginine/serine-rich 15
5358991IncompleteBC024860splicing factor, arginine/serine-rich 15

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178923 NP_849254    

Related Sequences

 
mRNAGenPeptSwissProt
BC024860 AAH24860 Q8R1B3
BC053096 AAH53096 Q7TSH6
BC057592 AAH57592 Q6PFF0
AK048239 BAC33280 Q8BXA9
AK173120 BAD32398 Q69ZP8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scaf4 NP_849254 R.norvegicus Scaf4 245924   NP_001032424 94
H.sapiens SCAF4 57466 Gene Info NP_065757 83
A.gambiae AgaP_AGAP003369 1275046   XP_314272 45
D.melanogaster CG4266 37411   NP_001097394 43
C.elegans nrd-1 172064   NP_491403 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)