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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nup98, nucleoporin 98
Sequence ID:NM_022979
Entrez Gene ID:269966
Ensembl ID:ENSMUSG00000063550

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E2|7 51.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 102119470 - 102132758

 Exon Info From UCSC:
NM_022979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5697919Full LengthBC112912nucleoporin 98
6417631Full LengthBC050911nucleoporin 98
6417631Full LengthBC057608nucleoporin 98
8860994Full LengthBC137975nucleoporin 98
9053619Full LengthBC145071nucleoporin 98
831659IncompleteBC099600nucleoporin 98
1434347IncompleteBC037506nucleoporin 98
4010529IncompleteBC039912nucleoporin 98
30465124IncompleteBC078630nucleoporin 98

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022979 NP_075355 Q6PFD9 Nucleoporin2

Related Sequences

 
mRNAGenPeptSwissProt
AF201386 AAG42323 Q9EQM8
BC050911 AAH50911 Q6PFD9
BC057608 AAH57608 Q6PFD9
BC078630 AAH78630 Q68G59
BC099600 AAH99600 Q4FZE7
BC112912 AAI12913 Q6PFD9
BC137975 AAI37976 B2RQL0
BC145071 AAI45072 B7ZN81
AK146491 BAE27210 Q3UJE5
AK164402 BAE37773 Q3TPG3
AK164743 BAE37897 Q3TP40

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nup98 NP_075355 A.thaliana AT1G10390 837579   NP_172510 37
A.thaliana AT1G59660 842256   NP_176175 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)