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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sema4a, sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Sequence ID:NM_001163489
NM_001163490
NM_001163491
NM_013658
Entrez Gene ID:20351
Ensembl ID:ENSMUSG00000028064

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 88435963 - 88454874

 Exon Info From UCSC:
NM_001163489
NM_001163490
NM_001163491
NM_013658

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5102015Full LengthBC025800sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038686  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163489 NP_001156961    
NM_001163490 NP_001156962    
NM_001163491 NP_001156963    
NM_013658 NP_038686 Q62178 Sema
PSI

Related Sequences

 
mRNAGenPeptSwissProt
BC025800 AAH25800  
AK152728 BAE31450  
AK153164 BAE31774  
AK154392 BAE32555  
X85991 CAA59983 Q62178

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sema4a NP_001156961 R.norvegicus Sema4a 310630   NP_001012078 95
H.sapiens SEMA4A 64218 Gene Info NP_001180229 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)