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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ifit1, interferon-induced protein with tetratricopeptide repeats 1
Sequence ID:NM_008331
Entrez Gene ID:15957
Ensembl ID:ENSMUSG00000034459

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 C1|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 34640886 - 34649507

NM_008331 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1993471537834715476
10026383472196034724498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3496673Full LengthBC003768interferon-induced protein with tetratricopeptide repeats 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032357  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008331 NP_032357 Q64282
Q3UNG3
TPR_1

Related Sequences

 
mRNAGenPeptSwissProt
U43084 AAC52625 Q64282
Q3UNG3
BC003768 AAH03768 Q64282
AK089608 BAC40930 Q8BN43
AK144230 BAE25784 Q64282
Q3UNG3
AK150352 BAE29489 Q64282
AK150424 BAE29547 Q64282
AK150609 BAE29700 Q64282
AK151125 BAE30133 Q64282
AK151158 BAE30163 Q64282
AK151278 BAE30265 Q64282
AK151298 BAE30281 Q64282
AK152753 BAE31468 Q3U7A2
AK152853 BAE31546 Q3U726
AK153184 BAE31785 Q64282
AK153500 BAE32046 Q3U5N2
AK153532 BAE32070 Q3U5K8
AK157848 BAE34228 Q64282
CT010226 CAJ18434 Q64282

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifit1 NP_032357 R.norvegicus Ifit1 56824   NP_064481 86
H.sapiens IFIT1B 439996 Gene Info NP_001010987 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)