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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ryr1, ryanodine receptor 1, skeletal muscle
Sequence ID:NM_009109
Entrez Gene ID:20190
Ensembl ID:ENSMUSG00000030592

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 A2-B3|7 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 29003343 - 29125151

 Exon Info From UCSC:
NM_009109

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4501709IncompleteBC055487ryanodine receptor 1, skeletal muscle
5011473IncompleteBC051248ryanodine receptor 1, skeletal muscle

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033135  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009109 NP_033135 E9PZQ0 Ion_trans
SPRY
RYDR_ITPR
RyR
MIR
RR_TM4-6
RIH_assoc

Related Sequences

 
mRNAGenPeptSwissProt
U23754 AAA64955 E9PZQ0
BC051248 AAH51248 E9PZQ0
BC055487 AAH55487 E9PZQ0
AY268935 AAP29981 E9PZQ0
D21796 BAA04821 E9PZQ0
D38216 BAA07391 E9PZQ0
AK081432 BAC38218 Q8C4R0
X83932 CAA58784 E9PZQ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ryr1 NP_033135 R.norvegicus Ryr1l 114207   XP_341819 98
H.sapiens RYR1 6261 Gene Info NP_000531 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)