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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ihh, Indian hedgehog
Sequence ID:NM_010544
Entrez Gene ID:16147
Ensembl ID:ENSMUSG00000006538

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C3|1 40.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 74947723 - 74951444

NM_010544 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2114507499189174993320
145117127499487774995138
171324647499747374998224

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6477118Full LengthBC046984Indian hedgehog

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034674  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010544 NP_034674 Q80XI9 Hint
HH_signal

Related Sequences

 
mRNAGenPeptSwissProt
U85610 AAB49692 Q80XI9
P97812
BC046984 AAH46984 Q80XI9
AK144322 BAE25832 Q80XI9
X76291 CAA53923 P97812

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ihh NP_034674 R.norvegicus Ihh 84399   NP_445836 98
H.sapiens IHH 3549 Gene Info NP_002172 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)