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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tub, tubby candidate gene
Sequence ID:NM_021885
Entrez Gene ID:22141
Ensembl ID:ENSMUSG00000031028

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E3|7 51.45 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 109010906 - 109012215

 Exon Info From UCSC:
NM_021885

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30616697Full LengthBC096554tubby candidate gene
4527484IncompleteBC030921tubby candidate gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068685  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021885 NP_068685 P50586
Q4VA41
Tub

Related Sequences

 
mRNAGenPeptSwissProt
U54643 AAB53495 P50586
Q4VA41
U52433 AAC52510 P50586
Q4VA41
U52824 AAC52512 P50586
BC030921 AAH30921 Q8K0N2
BC096554 AAH96554 P50586
Q4VA41
AK147700 BAE28083 P50586
Q4VA41
AK165720 BAE38352 Q3TMT9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tub NP_068685 H.sapiens TUB 7275 Gene Info NP_003311 96
A.gambiae AgaP_AGAP011959 1280713   XP_320575 48
D.melanogaster king-tubby 37400   NP_995911 48
C.elegans tub-1 174312   NP_495710 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta