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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Scn1a, sodium channel, voltage-gated, type I, alpha
Sequence ID:NM_018733
Entrez Gene ID:20265
Ensembl ID:ENSMUSG00000064329

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1.3|2 36.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 66273788 - 66280800

 Exon Info From UCSC:
NM_018733

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5361050IncompleteBC034643sodium channel, voltage-gated, type I, alpha
5361055IncompleteBC023034sodium channel, voltage-gated, type I, alpha

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018733 NP_061203    

Related Sequences

 
mRNAGenPeptSwissProt
L42339 AAA67107 Q62206
BC023034 AAH23034 Q05BQ0
BC034643 AAH34643 Q05BQ0
EF591872 ABV44378 B2X2D5
AJ810515 CAH17959 Q68V28

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scn1a NP_061203 R.norvegicus Scn1a 81574   NP_110502 99
H.sapiens SCN1A 6323 Gene Info NP_001159435 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)