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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr6a1, nuclear receptor subfamily 6, group A, member 1
Sequence ID:NM_001159548
NM_001159549
NM_010264
Entrez Gene ID:14536
Ensembl ID:ENSMUSG00000063972

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 38723369 - 38927688

 Exon Info From UCSC:
NM_001159548
NM_001159549
NM_010264

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063345Full LengthBC157064nuclear receptor subfamily 6, group A, member 1
40048922IncompleteBC126890nuclear receptor subfamily 6, group A, member 1
100061697BC156284nuclear receptor subfamily 6, group A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034394  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001159548 NP_001153020    
NM_001159549 NP_001153021    
NM_010264 NP_034394 Q64249 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U09563 AAA64746 Q64249
U14666 AAA92682 Q64249
BC156284 AAI56285  
BC157064 AAI57065  
AF390896 AAM55193 Q64249

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr6a1 NP_034394 R.norvegicus Nr6a1 362125   XP_342428 99
H.sapiens NR6A1 2649 Gene Info NP_201591 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)