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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Serpina1b, serine (or cysteine) preptidase inhibitor, clade A, member 1B
Sequence ID:NM_009244
Entrez Gene ID:20701
Ensembl ID:ENSMUSG00000071178

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 103763595 - 103773592

NM_009244 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
10287104966365104966642
288438104967440104967590
439709104968459104968729
7101341104970170104970801
13421434104976306104976398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4194027Full LengthBC012874serine (or cysteine) preptidase inhibitor, clade A, member 1B
5053771Full LengthBC025445serine (or cysteine) preptidase inhibitor, clade A, member 1B
5133541Full LengthBC022109serine (or cysteine) preptidase inhibitor, clade A, member 1B
5137448Full LengthBC049255serine (or cysteine) preptidase inhibitor, clade A, member 1B
5125410IncompleteBC037008serine (or cysteine) preptidase inhibitor, clade A, member 1b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033272  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009244 NP_033270 P22599 Serpin
NM_009245 NP_033271 Q00896 Serpin
NM_009246 NP_033272 Q00897 Serpin

Related Sequences

 
mRNAGenPeptSwissProt
M25529 AAA37132 P22599
M75716 AAC28865 P22599
M75718 AAC28867 Q00897
M75720 AAC28868 Q00896
BC009818 AAH09818 Q00896
BC010984 AAH10984 Q00896
BC010988 AAH10988 Q00896
BC011041 AAH11041 Q00896
BC012874 AAH12874 Q91X22
BC015266 AAH15266 Q00896
BC021325 AAH21325 Q00896
BC021780 AAH21780 Q00896
BC021850 AAH21850 Q8VC41
BC022109 AAH22109 Q3KQQ4
P22599
BC024108 AAH24108 Q00896
BC025445 AAH25445 Q3KQQ4
P22599
BC031707 AAH31707 Q00896
BC049255 AAH49255 Q3KQQ4
P22599
BC106098 AAI06099 Q3KQQ4
AK002537 BAB22173 Q00897
XM_003945662 XP_003945711  
XM_003945663 XP_003945712  
XM_003945664 XP_003945713  
XM_003945665 XP_003945714  
XM_003945666 XP_003945715  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Serpina1b NP_033270 M.musculus Serpina1a 20700 Gene Info NP_033269 95
M.musculus Serpina1c 20702 Gene Info NP_033271 95
M.musculus Serpina1d 20703   NP_033272 94
M.musculus Serpina1e 20704 Gene Info NP_033273 93
R.norvegicus Serpina1 24648   NP_071964 77
H.sapiens SERPINA1 5265 Gene Info NP_001121179 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)