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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Serpina1c, serine (or cysteine) peptidase inhibitor, clade A, member 1C
Sequence ID:NM_009245
Entrez Gene ID:20702
Ensembl ID:ENSMUSG00000079015

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 103895896 - 103898784

NM_009245 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1278105133135105133412
279429105134214105134364
430700105135250105135520
7011332105136967105137598
13331424105143068105143159

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4160260Full LengthBC021780serine (or cysteine) peptidase inhibitor, clade A, member 1C
4163602Full LengthBC010984serine (or cysteine) peptidase inhibitor, clade A, member 1C
4193647Full LengthBC011041serine (or cysteine) peptidase inhibitor, clade A, member 1C
4211464Full LengthBC009818serine (or cysteine) peptidase inhibitor, clade A, member 1C
5052898Full LengthBC021325serine (or cysteine) peptidase inhibitor, clade A, member 1C
5099206Full LengthBC024108serine (or cysteine) peptidase inhibitor, clade A, member 1C
5123976Full LengthBC031707serine (or cysteine) peptidase inhibitor, clade A, member 1C
4209679IncompleteBC015266serine (or cysteine) peptidase inhibitor, clade A, member 1C
4210562IncompleteBC010988serine (or cysteine) peptidase inhibitor, clade A, member 1C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033271  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009245 NP_033271 Q00896 Serpin

Related Sequences

 
mRNAGenPeptSwissProt
M75720 AAC28868 Q00896
BC009818 AAH09818 Q00896
BC010984 AAH10984 Q00896
BC010988 AAH10988 Q00896
BC011041 AAH11041 Q00896
BC015266 AAH15266 Q00896
BC021325 AAH21325 Q00896
BC021780 AAH21780 Q00896
BC024108 AAH24108 Q00896
BC031707 AAH31707 Q00896

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Serpina1c NP_033271 M.musculus Serpina1a 20700 Gene Info NP_033269 97
M.musculus Serpina1b 20701 Gene Info NP_033270 95
M.musculus Serpina1d 20703   NP_033272 95
M.musculus Serpina1e 20704 Gene Info NP_033273 94
R.norvegicus Serpina1 24648   NP_071964 79
H.sapiens SERPINA1 5265 Gene Info NP_001121179 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)