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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Serpina1b, serine (or cysteine) preptidase inhibitor, clade A, member 1B
Sequence ID:NM_009244
Entrez Gene ID:20701
Ensembl ID:ENSMUSG00000071178

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 103728155 - 103863555

NM_009244 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
10287104966365104966642
288438104967440104967590
439709104968459104968729
7101341104970170104970801
13421434104976306104976398

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4194027Full LengthBC012874serine (or cysteine) preptidase inhibitor, clade A, member 1B
5053771Full LengthBC025445serine (or cysteine) preptidase inhibitor, clade A, member 1B
5133541Full LengthBC022109serine (or cysteine) preptidase inhibitor, clade A, member 1B
5137448Full LengthBC049255serine (or cysteine) preptidase inhibitor, clade A, member 1B
5125410IncompleteBC037008serine (or cysteine) preptidase inhibitor, clade A, member 1b

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033270  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009244 NP_033270 P22599 Serpin

Related Sequences

 
mRNAGenPeptSwissProt
M25529 AAA37132 P22599
M75716 AAC28865 P22599
BC012874 AAH12874 Q91X22
BC022109 AAH22109 Q3KQQ4
P22599
BC025445 AAH25445 Q3KQQ4
P22599
BC049255 AAH49255 Q3KQQ4
P22599
BC106098 AAI06099 Q3KQQ4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Serpina1b NP_033270 M.musculus Serpina1a 20700 Gene Info NP_033269 95
M.musculus Serpina1c 20702 Gene Info NP_033271 95
M.musculus Serpina1d 20703   NP_033272 94
M.musculus Serpina1e 20704 Gene Info NP_033273 93
R.norvegicus Serpina1 24648   NP_071964 77
H.sapiens SERPINA1 5265 Gene Info NP_001121179 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)