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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Serpina1a, serine (or cysteine) peptidase inhibitor, clade A, member 1A
Sequence ID:NM_001252569
NM_009243
Entrez Gene ID:20700
Ensembl ID:ENSMUSG00000066366

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 E|12 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 103853590 - 103863551

Transcript StartTranscript EndChromosomal Start Chromosomal End
1408105091668105092075
409559105092877105093027
560830105093913105094183
8311462105095634105096265
14631560105101731105101828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4159448Full LengthBC011040serine (or cysteine) peptidase inhibitor, clade A, member 1A
4160332Full LengthBC049970serine (or cysteine) peptidase inhibitor, clade A, member 1A
4223129Full LengthBC106098serine (or cysteine) peptidase inhibitor, clade A, member 1A
5100593Full LengthBC057989serine (or cysteine) peptidase inhibitor, clade A, member 1A
5123904Full LengthBC037007serine (or cysteine) peptidase inhibitor, clade A, member 1A
5126441Full LengthBC057984serine (or cysteine) peptidase inhibitor, clade A, member 1A
5134754Full LengthBC057982serine (or cysteine) peptidase inhibitor, clade A, member 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033269  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252569 NP_001239498    
NM_009243 NP_033269 P07758 Serpin
NM_009244 NP_033270 P22599 Serpin
NM_009245 NP_033271 Q00896 Serpin

Related Sequences

 
mRNAGenPeptSwissProt
M25529 AAA37132 P22599
M75716 AAC28865 P22599
M75720 AAC28868 Q00896
M75721 AAC28869 P07758
BC009818 AAH09818 Q00896
BC010984 AAH10984 Q00896
BC010988 AAH10988 Q00896
BC011040 AAH11040 P07758
BC011041 AAH11041 Q00896
BC012874 AAH12874 Q91X22
BC015266 AAH15266 Q00896
BC021325 AAH21325 Q00896
BC021780 AAH21780 Q00896
BC022109 AAH22109 Q3KQQ4
P22599
BC024108 AAH24108 Q00896
BC025445 AAH25445 Q3KQQ4
P22599
BC031707 AAH31707 Q00896
BC037007 AAH37007 P07758
BC049255 AAH49255 Q3KQQ4
P22599
BC049970 AAH49970 P07758
BC057982 AAH57982 P07758
BC057984 AAH57984 P07758
BC057989 AAH57989 P07758
BC106098 AAI06099 Q3KQQ4
AK146619 BAE27308 P07758

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Serpina1a NP_033269 M.musculus Serpina1c 20702 Gene Info NP_033271 97
M.musculus Serpina1d 20703   NP_033272 95
M.musculus Serpina1b 20701 Gene Info NP_033270 95
M.musculus Serpina1e 20704 Gene Info NP_033273 94
R.norvegicus Serpina1 24648   NP_071964 78
H.sapiens SERPINA1 5265 Gene Info NP_001121179 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)