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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Htr2c, 5-hydroxytryptamine (serotonin) receptor 2C
Sequence ID:NM_008312
Entrez Gene ID:15560
Ensembl ID:ENSMUSG00000041380

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X D-F4|X 66.15 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 146962512 - 147197274

NM_008312 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1562143397055143397616
563620143416090143416147
621723143506927143507029
7241040143510273143510589
10411241143604112143604312
12424750143628311143631819

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055697Full LengthBC1410855-hydroxytryptamine (serotonin) receptor 2C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032338  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008312 NP_032338 Q8BZI5
P34968
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC141085 AAI41086 B2RUD4
AK034512 BAC28738 Q8BZI5
AK086348 BAC39653 Q8BUB1
X72230 CAA51031 P34968

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Htr2c NP_032338 R.norvegicus Htr2c 25187   NP_036897 98
H.sapiens HTR2C 3358 Gene Info NP_000859 91
A.gambiae GPR5HT2A 1269329   XP_307953 40
C.elegans ser-1 181716   NP_001024728 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta