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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabra1, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1
Sequence ID:NM_010250
Entrez Gene ID:14394
Ensembl ID:ENSMUSG00000010803

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A5|11 19.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 42131479 - 42182930

NM_010250 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123114194498141947291
231225144194890941949111
251526674195375041953902
266828114196059141960734
281228944196683541966917
289531154196831041968530
311631834197605541976122
318432934198940341989512
329433824199306141993149
338341474199566741996431

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860752Full LengthBC137733gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1
40130608Full LengthBC132331gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034380  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010250 NP_034380 P62812 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
M63436 AAA37654 P62812
M86566 AAB59634 P62812
BC132331 AAI32332 Q544F7
BC137733 AAI37734 Q544F7
AK034095 BAC28585 Q544F7
P62812
AK039496 BAC30368 Q544F7
P62812
AK141596 BAE24754 Q3URD4
X61430 CAA43672 P62812

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabra1 NP_034380 R.norvegicus Gabra1 29705   NP_899155 100
H.sapiens GABRA1 2554 Gene Info NP_000797 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta