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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pcdh11x, protocadherin 11 X-linked
Sequence ID:NM_001271809
NM_001271810
NR_073451
NR_073452
NM_001081385
Entrez Gene ID:245578

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X E2|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 120400073 - 120401378


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40086368Full LengthBC126930protocadherin 11 X-linked

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001081385 NP_001074854    
NM_001271809 NP_001258738    
NM_001271810 NP_001258739    

Related Sequences

 
mRNAGenPeptSwissProt
BC126930 AAI26931 A0JNT1
AF383875 AAO13808 Q8CH63
AY861426 AAX56116 Q2TJH9
AY861427 AAX56117 Q2TJH8
AY861428 AAX56118 Q2TJH7
AY861429 AAX56119 Q2TJH6
AY861430 AAX56120 Q2TJH5
EU854474 ACF75932 B5AK95
AK032315 BAC27808 Q8CCQ2
AK039071 BAC30231 Q8CAC6
AJ564976 CAD92447 Q6KEQ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pcdh11x NP_001074854 R.norvegicus Pcdh11x 317204   XP_228479 92
H.sapiens PCDH11X 27328 Gene Info NP_116750 82
H.sapiens PCDH11Y 83259 Gene Info NP_116755 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)