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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lgals1, Lectin, galactose binding, soluble 1
Sequence ID:NM_008495
Entrez Gene ID:16852
Ensembl ID:ENSMUSG00000068220

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E|15 44.9

Chromosomal Position (from UCSC)

Chromosomal Position:15: 78926725 - 78930466

NM_008495 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1807875715478757233
811607875839978758478
1613327876006278760233
3338007876042778760894

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3494931Full LengthBC002063lectin, galactose binding, soluble 1
30841237Full LengthBC099479lectin, galactose binding, soluble 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032521  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008495 NP_032521 P16045 Gal-bind_lectin

Related Sequences

 
mRNAGenPeptSwissProt
M33214 AAA37313 P16045
M57470 AAA37667 P16045
BC002063 AAH02063 P16045
BC099479 AAH99479 P16045
X15986 CAA34117 P16045
X51903 CAA36183 P16045
X53067 CAA37242 P16045
X66532 CAA47143 P16045

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lgals1 NP_032521 R.norvegicus Lgals1 56646   NP_063969 96
H.sapiens LGALS1 3956 Gene Info NP_002296 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)