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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Bin1, bridging integrator 1
Sequence ID:NM_001083334
NM_009668
Entrez Gene ID:30948
Ensembl ID:ENSMUSG00000024381

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18 14.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 32426155 - 32428945

 Exon Info From UCSC:
NM_001083334
NM_009668

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5718309Full LengthBC065160bridging integrator 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033798  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001083334 NP_001076803    
NM_009668 NP_033798 O08539 SH3_1
BAR

Related Sequences

 
mRNAGenPeptSwissProt
U60884 AAC52661 O08539
BC065160 AAH65160 Q6P1B9
AK077987 BAC37090 Q8C5M9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bin1 NP_033798 R.norvegicus Bin1 117028   NP_446411 99
H.sapiens BIN1 274 Gene Info NP_647593 96
D.melanogaster Amph 36383   NP_523717 35
C.elegans amph-1 177797   NP_501711 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)