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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nup85, nucleoporin 85
Sequence ID:NM_001002929
Entrez Gene ID:445007
Ensembl ID:ENSMUSG00000020739

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 115564529 - 115583822

 Exon Info From UCSC:
NM_001002929

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6403446Full LengthBC079856nucleoporin 85

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001002929  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001002929 NP_001002929 Q8R480 Nucleopor_Nup85

Related Sequences

 
mRNAGenPeptSwissProt
BC079856 AAH79856 Q8R480
AF498263 AAM18529 Q8R480
AK017632 BAB30848 Q8R480

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nup85 NP_001002929 R.norvegicus Nup85 287830   NP_001020572 97
H.sapiens NUP85 79902 Gene Info NP_079120 92
D.melanogaster Nup75 37078   NP_611300 34
A.gambiae AgaP_AGAP012362 1280349   XP_320194 32
A.thaliana AT4G32910 829427   NP_567908 31
C.elegans npp-2 172611   NP_492256 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)