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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Rps14, ribosomal protein S14
Sequence ID:NM_020600
Entrez Gene ID:20044
Ensembl ID:ENSMUSG00000024608

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E1|18 30.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 60774651 - 60778545

NM_020600 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1916093424960934339
922426093605460936204
2434046093658360936744
4054816093746660937542
4825966093808460938198

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5683900Full LengthBC062874ribosomal protein S14
5684375Full LengthBC081449ribosomal protein S14
6487681Full LengthBC042940ribosomal protein S14

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065625  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020600 NP_065625 P62264 Ribosomal_S11

Related Sequences

 
mRNAGenPeptSwissProt
BC042940 AAH42940 P62264
BC062874 AAH62874 P62264
BC081449 AAH81449 P62264
AK003148 BAB22604 P62264
AK011213 BAB27472 P62264
AK012425 BAB28230 P62264
AK012584 BAB28334 P62264
AK019233 BAB31615 P62264
AK028106 BAC25751 P62264
AK146325 BAE27080 Q3UJS5
AK146976 BAE27580 P62264
AK168237 BAE40187 P62264

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rps14 NP_065625 H.sapiens RPS14 6208 Gene Info NP_005608 100
R.norvegicus Rps14 29284   NP_073163 99
A.gambiae RS14A_ANOGA 1272446   XP_311181 89
A.gambiae RS14B_ANOGA 1273618   XP_312618 89
D.melanogaster RpS14a 47218   NP_524884 87
D.melanogaster RpS14b 47219   NP_536352 87
A.thaliana AT3G11510 820324   NP_187758 87
C.elegans rps-14 176006   NP_498572 87
N.crassa NCU07830 3879099   XP_962951 87
A.thaliana AT2G36160 818188   NP_181158 86
A.thaliana AT3G52580 824424   NP_190826 86
S.pombe rps1401 2543458   NP_594187 84
S.pombe rps1401 2540817   NP_595737 84
S.cerevisiae RPS14B 853248   NP_012344 83
S.cerevisiae RPS14A 850397   NP_009960 83
P.falciparum PFE0810c 812977   XP_001351719 78

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)