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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Fto, fat mass and obesity associated
Sequence ID:NM_011936
Entrez Gene ID:26383
Ensembl ID:ENSMUSG00000055932

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 41.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 91313538 - 91668430

NM_011936 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1969383742393837518
971749392570593925782
1757939393312193933739
7949379396556193965704
93810179399221593992294
101811619399820793998350
116212819400905794009176
128214069404667094046794
140735589419018094192331

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4237261Full LengthBC022222fat mass and obesity associated
5708558Full LengthBC057008fat mass and obesity associated

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011936 NP_036066 Q8BGW1  

Related Sequences

 
mRNAGenPeptSwissProt
BC022222 AAH22222 Q8BGW1
BC057008 AAH57008 Q8BGW1
AK036677 BAC29533 Q8BGW1
AK040866 BAC30724 Q8BGW1
AK045465 BAC32382 Q8BGW1
AK049502 BAC33780 Q8BGW1
AK088881 BAC40629 Q8BGW1
AK129437 BAC98247 Q8BGW1
AK161060 BAE36177 Q8BGW1
AJ237917 CAB59324 Q8BGW1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Fto NP_036066 R.norvegicus Fto 291905   NP_001034802 96
H.sapiens FTO 79068 Gene Info NP_001073901 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)