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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pkd1l3, polycystic kidney disease 1 like 3
Sequence ID:NM_001039700
NM_181544
Entrez Gene ID:244646
Ensembl ID:ENSMUSG00000048827

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8|8 A

Chromosomal Position (from UCSC)

Chromosomal Position:8: 109614516 - 109670721

 Exon Info From UCSC:
NM_001039700
NM_181544

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_853522  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039700 NP_001034789 Q2EG98  
NM_181544 NP_853522   PLAT
GPS
PKD_channel

Related Sequences

 
mRNAGenPeptSwissProt
AY164486 AAO32799 Q2EG98
DQ382344 ABD36562 Q2EG98
DQ382345 ABD36563 Q2EG98
DQ382346 ABD36564 Q2EG98
DQ382347 ABD36565 Q2EG98
DQ382348 ABD36566 Q2EG98
DQ382349 ABD36567 Q2EG98
DQ382350 ABD36568 Q2EG98
AB290926 BAF45379 A2A258

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pkd1l3 NP_001034789 R.norvegicus LOC100362565 100362565   XP_002728660 84
H.sapiens PKD1L3 342372 Gene Info NP_853514 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)