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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Traf3ip2, TRAF3 interacting protein 2
Sequence ID:NM_134000
Entrez Gene ID:103213
Ensembl ID:ENSMUSG00000019842

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 39625857 - 39654529

NM_134000 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14133933273939333151
41412233934565539346464
122414133935434039354529
141415923935902539359203
159316813936111139361199
168217503936551339365581
175118673936665439366770
186819423937071139370785
194328673937418839375112

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5310588Full LengthBC096483TRAF3 interacting protein 2
8861253Full LengthBC138234TRAF3 interacting protein 2
8861254Full LengthBC138235TRAF3 interacting protein 2
5031352IncompleteBC071207TRAF3 interacting protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598761  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_134000 NP_598761 Q8N7N6 SEFIR

Related Sequences

 
mRNAGenPeptSwissProt
BC022633 AAH22633 Q8R227
BC071207 AAH71207 Q6IR26
BC096483 AAH96483 Q8N7N6
BC138234 AAI38235 Q8N7N6
BC138235 AAI38236 Q8N7N6
AK098107 BAC05236 Q8N7N6
AK031556 BAC27449 Q8C0E5
AK037407 BAC29801 Q8N7N6
AK052190 BAC34875 Q8N7N6
AB238206 BAF34919 I7GPR1
AB238207 BAF34920 I7GPT0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Traf3ip2 NP_598761 R.norvegicus Traf3ip2 361857   NP_001037713 89
H.sapiens TRAF3IP2 10758 Gene Info NP_679211 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)